COURSES

-> About this Resource
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-> Preliminary Courses
Contents & Objectives *__________________
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-> Botany
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-> Axis Typology Patterns
Typology basis *___________
Pictograms *_________
Sexuality & development *___________________
Growth *______
Branching rhythms *______________
Branching delays *_____________
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-> Architectural Unit
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-> An Example
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Wild Cherry (adult) *______________
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-> Applied Mathematics
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-> Overview
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GreenLab vs PbM & FSPM *___________________
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Preliminary Course

Applied Mathematics

Probabilities. Some Usefull probability Laws


Bernoulli trials

    A first introductive example
    The most famous example of a Bernoulli process is that of successive tosses of a balanced coin.
    On the question did the coin land heads?, we can define p as a probability of success and q as a probability of failure.
    For a fair coin, we have p = q =1/2.

    A second example
    A probabilistic view of plant development consists in considering that stems elongate by the successive addition of some basic units called phytomers.
    Assume that a stem has a probability 0.8 to set in place a phytomer every month.
    Therefore, every month, the stem can either produce a new phytomer (success event) or be in pause (failure).
    The appearance of a phytomer thus follows a Bernoulli process with the probability of success being p = 0.8.

    A probabilist approach of development
    A new phytomer apparition seen as a Probability of success event (Drawing V. Letort-Lechevalier)
       Left scenario: the success case (with a probability 0.8 to occur); a new phytomer appears
       Right scenario: the failure case (with a probability 0.2 to occur); no new phytomer appears, the terminal bud rests



    Definition.
    Repeated independent trials are called Bernoulli trials if there are only two possible outcomes for each trial and their probabilities remain the same throughout the trials.

    The sample space of each individual trial is formed by the two possible outcomes, which are usually referred to as S (Success) and F (Failure).
    The sample space of n Bernoulli trials contains 2n points or successions of n symbols S and F, each representing one possible outcome of the compound experiment.
    If the probability of Success is denoted as p, then the probability of failure is obviously q = 1 - p.

    The probability of any specified sequence {S, F, F, F, S} is the product of the corresponding probabilities, pqqqp = p2(1-p)3.
Exercises
    Cecropia is one of the most emblematic pioneer genera in the Neotropics.

    These species are able to colonise cleared areas with high light levels, in particular after disturbances, and are thus essential contributors to the regeneration of mature forests.

    Assume that young Cecropia sciadophylla have a probability p = 0.6 to set in place a phytomer every two weeks.

    Let us note 'M' the event phytomer appearance and 'P' for a pause in the development.
      1. What is the probability of observing a pause P?
        
      0.24        0.36        0.40        0.60       


      2. Successive Bernoulli trials are hold with success ('M') probability p = 0.8
      Which ones of the following sequences are generated with probability 0.1024 ?


         a sequence of more than 1 trial
         MM
         MPM
         PPMM
         MPMP
         MMMP
         MPMM
         PPPP
         a sequence of more than 10 trials       
       Cecropia
    Cecropia sciadophylla (Photos P. Heuret, INRA)
        Left: global view.
        Right, top, a phytomer.
        Right bottom: counting internodes on a stem section.
Definition

Metamer (Phytomer)
Botany. Botanical entity formed by a node, associated with its leaf (or leaves) and axillary bud(s) plus the subtending internode. First defined by White, 1979.

Definition

Bernoulli trial , process
Mathematics. In the theory of probability and statistics, a Bernoulli trial (or binomial trial) is a random experiment with exactly two possible outcomes, "success" and "failure", in which the probability of success is the same every time the experiment is conducted. The mathematical formalization of the Bernoulli trial is known as the Bernoulli process.